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Publish genes predicted with Prodigal#217

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skrakau merged 3 commits intonf-core:devfrom
skrakau:publish_gene_annos
Jul 24, 2021
Merged

Publish genes predicted with Prodigal#217
skrakau merged 3 commits intonf-core:devfrom
skrakau:publish_gene_annos

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@skrakau skrakau commented Jul 20, 2021

Publish genes predicted with Prodigal within BUSCO run.

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
    • If you've added a new tool - add to the software_versions process and a regex to scrape_software_versions.py
    • If you've added a new tool - have you followed the pipeline conventions in the [contribution docs](https://github.com/nf-core/mag/tree/master/.github/CONTRIBUTING.md)
    • If necessary, also make a PR on the nf-core/mag branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint .).
  • Ensure the test suite passes (nextflow run . -profile test,docker).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@skrakau skrakau requested a review from d4straub July 20, 2021 12:23
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skrakau commented Jul 20, 2021

... needs template update first.

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Looks good to me!

@skrakau skrakau merged commit 2cf8407 into nf-core:dev Jul 24, 2021
@skrakau skrakau mentioned this pull request Jul 24, 2021
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skrakau commented Jul 26, 2021

(addresses point in #34)

@skrakau skrakau deleted the publish_gene_annos branch July 22, 2022 09:21
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2 participants