Skip to content

Add strict syntax linting to template#4128

Merged
LouisLeNezet merged 5 commits intodevfrom
LouisLeNezet-add_nextflow_lint
Mar 23, 2026
Merged

Add strict syntax linting to template#4128
LouisLeNezet merged 5 commits intodevfrom
LouisLeNezet-add_nextflow_lint

Conversation

@LouisLeNezet
Copy link
Copy Markdown
Contributor

Add nextflow lint for strict syntax support in pipeline template

PR checklist

  • This comment contains a description of changes (with reason)
  • CHANGELOG.md is updated
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated

@codecov
Copy link
Copy Markdown

codecov Bot commented Mar 23, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.46%. Comparing base (573f105) to head (d72dbbc).
⚠️ Report is 6 commits behind head on dev.

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

Copy link
Copy Markdown
Contributor

@mashehu mashehu left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks for tackling this, was on my to-do list for this week.
I think adding it to the pre-commit-config.yml like we did in modules is the cleaner approach.

@LouisLeNezet
Copy link
Copy Markdown
Contributor Author

This should be now done through the pre-commit config !

Comment thread nf_core/pipeline-template/.pre-commit-config.yaml Outdated
Comment thread nf_core/pipeline-template/.pre-commit-config.yaml Outdated
@LouisLeNezet LouisLeNezet merged commit aa3c3d0 into dev Mar 23, 2026
112 checks passed
@LouisLeNezet LouisLeNezet deleted the LouisLeNezet-add_nextflow_lint branch March 23, 2026 12:51
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants