Initial PyPI release of cubic, a Python library for CUDA-accelerated processing and analysis of multidimensional (2D/3D+) bioimages.
Highlights:
- Device-agnostic API wrapping scipy/scikit-image and CuPy/cuCIM
- GPU-accelerated Fourier Ring/Shell Correlation (FRC/FSC) for image resolution
- Richardson-Lucy deconvolution, average precision for segmentation, and more
- Install with pip install cubic
Citation:
Kalinin, A.A., Carpenter, A.E., Singh, S., & O'Meara, M.J. (2025). cubic: CUDA-accelerated 3D BioImage Computing. IEEE International Conference on Computer Vision Workshops (ICCVW).