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@alxndrkalinin alxndrkalinin released this 12 Feb 19:26
· 12 commits to main since this release

Initial PyPI release of cubic, a Python library for CUDA-accelerated processing and analysis of multidimensional (2D/3D+) bioimages.

Highlights:

  • Device-agnostic API wrapping scipy/scikit-image and CuPy/cuCIM
  • GPU-accelerated Fourier Ring/Shell Correlation (FRC/FSC) for image resolution
  • Richardson-Lucy deconvolution, average precision for segmentation, and more
  • Install with pip install cubic

Citation:

Kalinin, A.A., Carpenter, A.E., Singh, S., & O'Meara, M.J. (2025). cubic: CUDA-accelerated 3D BioImage Computing. IEEE International Conference on Computer Vision Workshops (ICCVW).