rapids-singlecell: GPU-accelerated framework for scRNA analysis

Create web-based user interfaces with Python. The nice way.

Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.

Friendly wrappers around TileDB

Official implementation of NerualSVG

A general, evolvable, and distributed agent framework & harness for data science.

a dataloader to work with large single cell datasets from lamindb

Arc Virtual Cell Atlas

Learn LeetCode and prepare for coding interviews with free resources.

My personal website, running on jekyll.

A portable, rechargeable theremin using ultrasonic transducers for distance sensing. Connect the device to any consumer-grade speaker or directly to your computer to record your sound!

You like pytorch? You like micrograd? You love tinygrad! ❤️

interactive & hardware agnostic SDK for lab automation

A native macOS KeePass client

A cross-platform, reimplementation of Notepad++

SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.

Google Chrome and Firefox extension that prevents the blocking of pasting into input fields

Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filte…

Pipeline for Universal Mapping of ATAC-seq

Saves Discord chat logs to a file

Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023

DisplayCAL Modernization Project

📖 A collection of pure POSIX sh alternatives to external processes.

AI PDF chatbot agent built with LangChain & LangGraph

An Obsidian theme inspired by the beautifully-designed app, Things.

Master Thesis

2D structural analysis in Python