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clinical-microschemas

Clinical microschemas for composable clinical data elements.

Overview

This repository contains LinkML microschemas for clinical domains, including:

  • ClinicalMeasurementRecord — observations, labs, scores
  • ConditionStatusRecord — diagnoses, signs, symptoms
  • DrugStatusRecord — medication exposures
  • ProcedureStatusRecord — clinical procedures

These schemas import and extend the LinkML Microschema Profile.

Usage

Install dependencies:

just install

Generate project artifacts:

just gen-project

Run tests:

just test

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Repository for clinical microschemas based on the linkml-microschema repo

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