Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model
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Updated
Dec 26, 2023 - Perl
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indels
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This script analyzes variant call format (VCF) files to identify genetic variants shared across multiple samples. Given a list of VCF paths, it reports variants present in ≥10-100% of samples (10% increments), showing chromosome, position, alleles, sample count, and percentage. Processes genotype data to ensure accurate variant presence detection
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Updated
May 18, 2025 - Perl
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