Pinned Loading

1. SegmentationGUI SegmentationGUI Public

   A GUI for Image Segmentation of microscopy images, with a focus on SPIM but with capabilities beyond.

   MATLAB 1

2. NucleusRadialModelClassification NucleusRadialModelClassification Public

   Classification of nuclei in microscopy image volume with multiple channels via a simple radial model assumption. Nuclei are classified as either positive or negative for a given channel.

   MATLAB

3. ConfocalLTAnalysis ConfocalLTAnalysis Public

   This project aims to expedite the analysis of line traces extracted from confocal images. Its primary application will be on identifying puncta along neural processes and their overlap with other f…

   Jupyter Notebook