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template: Fix nf-core tools version in download_pipeline.yml#4124

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beatrizsavinhas merged 3 commits intonf-core:devfrom
beatrizsavinhas:4122-fix-tools-version-in-download-pipeline
Mar 20, 2026
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template: Fix nf-core tools version in download_pipeline.yml#4124
beatrizsavinhas merged 3 commits intonf-core:devfrom
beatrizsavinhas:4122-fix-tools-version-in-download-pipeline

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@beatrizsavinhas beatrizsavinhas commented Mar 19, 2026

Closes #4122.

In the pipeline template, fixed the nf-core tools version for the GitHub workflow download_pipeline.yml to what is specified in .nf-core.yml, similarly to what is done for the linting.yml workflow.

PR checklist

  • This comment contains a description of changes (with reason)
  • CHANGELOG.md is updated
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated

@beatrizsavinhas beatrizsavinhas changed the base branch from main to dev March 19, 2026 09:10
@nf-core nf-core deleted a comment from github-actions Bot Mar 19, 2026
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codecov Bot commented Mar 19, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.46%. Comparing base (b029ff6) to head (4e83774).
⚠️ Report is 1 commits behind head on dev.

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@beatrizsavinhas beatrizsavinhas marked this pull request as ready for review March 19, 2026 10:19
@mashehu mashehu force-pushed the 4122-fix-tools-version-in-download-pipeline branch from 851b536 to 4e83774 Compare March 19, 2026 19:57
@beatrizsavinhas beatrizsavinhas merged commit 7030b9c into nf-core:dev Mar 20, 2026
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@muffato muffato mentioned this pull request Mar 29, 2026
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Fix nf-core tools version for GitHub workflow download_pipeline.yml

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